Endorsements by Martin Modrák

0000-0002-8886-7797

Lecturer/Statistician, Department of Bioinformatics, Second Faculty of Medicine, Charles University in Prague
Institute of Microbiology of the Czech Academy of Sciences
PhD, Charles University in Prague Faculty of Mathematics and Physics
MSc., Charles University in Prague Faculty of Mathematics and Physics
BSc., Charles University Faculty of Mathematics and Physics

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Endorsements

Causal claims about scientific rigor require rigorous causal evidence.
clearexcitingrobust
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There are no shortcuts to theory
clearrobust
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nf-core/rnaseq: nf-core/rnaseq v3.10.1 - Plastered Rhodium Rudolph
robust
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Twister Plots for Time-to-Event Studies
robustclear
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Survival ratio plots with permutation envelopes in survival data problems
clear
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Statistics in the Service of Science: Don't let the Tail Wag the Dog
clearrobust
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A hierarchical Bayesian approach for modeling changes in species composition
excitingclear
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How hard is cognitive science?
clearexciting
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Precise Answers to Vague Questions: Issues With Interactions
clearrobust
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Analyzing ordinal data with metric models: What could possibly go wrong?
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A personal essay on Bayes factors
exciting
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Formalizing verbal theories: A tutorial by dialogue
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If mathematical psychology did not exist we would need to invent it: A case study in cumulative theoretical development
clear
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Generalizing RNA velocity to transient cell states through dynamical modeling
clearexcitingrobust
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The case for formal methodology in scientific reform
clearexcitingrobust
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Aerosol and surface stability of HCoV-19 (SARS-CoV-2) compared to SARS-CoV-1
excitingclear
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A meta-analysis of global fungal distribution reveals climate-driven patterns
exciting
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Fundamental limits on dynamic inference from single-cell snapshots
excitingrobustclear
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rPredictorDB: a predictive database of individual secondary structures of RNAs and their formatted plots
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Ordinal Regression Models in Psychology: A Tutorial
excitingclearrobust
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The Value of Preregistration for Psychological Science: A Conceptual Analysis
clear
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A generalized Waring regression model for count data
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Between the devil and the deep blue sea: Tensions between scientific judgement and statistical model selection
robustexcitingclear
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Preregistration is redundant, at best
clear
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Visualization in Bayesian workflow
robustexcitingclear
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Robust summarization and inference in proteome-wide label-free quantification
exciting
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Modelling species abundance using the Poisson-Tweedie family
excitingclear
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Ms1 RNA increases the amount of RNA polymerase in Mycobacterium smegmatis
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Consistent metagenome-derived metrics verify and define bacterial species boundaries
clear
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Active promoters give rise to false positive ‘Phantom Peaks’ in ChIP-seq experiments
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A comprehensive comparison of tools for differential ChIP-seq analysis
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Compositional Data Analysis is necessary for simulating and analyzing RNA-Seq data
clearrobust
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Beta diversity as the variance of community data: dissimilarity coefficients and partitioning
clear
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Features that define the best ChIP-seq peak calling algorithms
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Consistent and correctable bias in metagenomic sequencing measurements
robustexcitingclear
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Persistent features of intermittent transcription
clear
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